Information for 22-GTGTGCGTAGGTC (Motif 42)

A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A C G T G T C A G T A C A C T G A G T C C G T A A G T C G T C A A G T C
p-value:1e-4
log p-value:-1.132e+01
Information Content per bp:1.937
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 18.4bp
Average Position of motif in Background49.7 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCGTAGGTC
NNNNTTGTGTGCTTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGTGCGTAGGTC-----
--TCGCGAAGGTTGTACT
 A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GTGTGCGTAGGTC-
--------AGGTCA
 A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCGTAGGTC
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GTGTGCGTAGGTC
GGGCCGTGTGCAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTGTGCGTAGGTC
RGKGGGCGGAGC--
 A C G T A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTGTGCGTAGGTC--
-TATAAGTAGGTCAA
 A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A C G T C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

EGR4/MA0733.1/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCGTAGGTC
AANTGCGTGGGCGTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GTGTGCGTAGGTC
ANTGCGTGGGCGTNN---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTGTGCGTAGGTC
---TGCGTGGGYG
 A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C G T C G T A A C T G A C T G A C G T A G T C
A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G