Information for 19-TTGCTTYCMRKTT (Motif 39)

A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A G T C A A G T C A C T G A C T G C T G A G T C A C G T A A C T G A T G C C G T A C G T A
p-value:1e-5
log p-value:-1.314e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.5 +/- 25.3bp
Average Position of motif in Background42.2 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1/MA0050.2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTGCTTYCMRKTT------
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTGCTTYCMRKTT-
--RSTTTCRSTTTC
 A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

SPIC/MA0687.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGCTTYCMRKTT--
-TACTTCCTCTTTTN
 A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGCTTYCMRKTT--
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTGCTTYCMRKTT-
--ACTTTCACTTTC
 A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTGCTTYCMRKTT--
TCAGTTTCATTTTCC
 A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGCTTYCMRKTT--
TCACTTTCACTTTCN
 A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

ELF3/MA0640.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGCTTYCMRKTT
TTACTTCCGGGTT
 A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T
G A C T G A C T C T G A G A T C C G A T A C G T T G A C A G T C A C T G A T C G A T C G C G A T C G A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGCTTYCMRKTT-
--AGTTTCAKTTTC
 A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGCTTYCMRKTT-
--AGTTTCAGTTTC
 A C G T A C G T A T C G A G T C A C G T A C G T A G C T A G T C G T A C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C