Information for 23-AGKRGAAWMRWGTRAM (Motif 36)

C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
Reverse Opposite:
C A T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A A C G T A C G T A G T C A G T C G T C A G T A C A C G T
p-value:1e-6
log p-value:-1.460e+01
Information Content per bp:1.806
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.7 +/- 10.3bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGKRGAAWMRWGTRAM
AGAGGAA---------
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGKRGAAWMRWGTRAM
AATGGAAAAT------
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGKRGAAWMRWGTRAM
NNTGGAAANN------
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGKRGAAWMRWGTRAM
AATGGAAAAT------
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGKRGAAWMRWGTRAM
--TGGAAAA-------
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGKRGAAWMRWGTRAM
-GGAGAAAGGTGCGA-
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGKRGAAWMRWGTRAM
NATGGAAAAN------
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGKRGAAWMRWGTRAM
------AAGGTGTKAA
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGKRGAAWMRWGTRAM
------AAGGTGTGAA
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AGKRGAAWMRWGTRAM---
------AAGGTGTGAAAAT
 C G T A A C T G A C G T C T A G A C T G C G T A C G T A C G A T G T C A T C A G C G A T A C T G A C G T C T A G C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T