Information for 16-RWTCCCAGCAYSC (Motif 29)

C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C
Reverse Opposite:
A C T G A T G C C T G A A C G T A C T G A G T C A G C T A C T G A C T G A C T G C T G A C G T A A G T C
p-value:1e-7
log p-value:-1.742e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.6 +/- 22.3bp
Average Position of motif in Background48.2 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-RWTCCCAGCAYSC-
ATTTCCCAGVAKSCY
 A C G T C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:RWTCCCAGCAYSC--
CCACACAGCAGGAGA
 C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:RWTCCCAGCAYSC--
GAGCACAGCAGGACA
 C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:RWTCCCAGCAYSC
TTTCCCAGAAN--
 C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:RWTCCCAGCAYSC--
CCACACAGCAGGAGA
 C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:RWTCCCAGCAYSC
--DCTCAGCAGG-
 C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RWTCCCAGCAYSC
-TGCCCAGNHW--
 C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------RWTCCCAGCAYSC
AACTACAATTCCCAGAATGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RWTCCCAGCAYSC
ATTTCCAAGAA---
 A C G T C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RWTCCCAGCAYSC
HTTTCCCASG----
 A C G T C T A G G C A T A G C T A G T C A G T C A G T C C T G A A C T G A G T C C G T A A G C T A T C G G T A C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T