Information for 16-CAGGGTGVTGTGCTGG (Motif 23)

A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G
Reverse Opposite:
A G T C G T A C C G T A A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A G T C G T A C A G T C A C G T A C T G
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.840
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.5 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGGGTGVTGTGCTGG-
-NNNNTTGTGTGCTTNN
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CAGGGTGVTGTGCTGG-
------AATTTGCTGAC
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CAGGGTGVTGTGCTGG-
-------CTGTTCCTGG
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CAGGGTGVTGTGCTGG------
-----AAATTTGCTGACTTAGA
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAGGGTGVTGTGCTGG-----
------AAANTGCTGACTNAG
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.53
Offset:10
Orientation:forward strand
Alignment:CAGGGTGVTGTGCTGG----
----------TGCTGACTCA
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAGGGTGVTGTGCTGG----
-----AAAWWTGCTGACWWD
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CAGGGTGVTGTGCTGG--
------AAAATGCTGACT
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGGGTGVTGTGCTGG
--GTGCCGTGTGCAAA
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G
A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGGGTGVTGTGCTGG
--GGGAATTGTAGT--
 A G T C G T C A A C T G A C T G A C T G C G A T T C A G T A C G A C G T A C T G A C G T A C T G T A G C A C G T A C T G C T A G
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T