Information for 4-AGCKCTGATTGGCTGG (Motif 5)

T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A A T C G A G T C G T A C C G T A C T G A C G A T A G T C G T C A T A C G G T A C A C T G A G T C A C G T
p-value:1e-15
log p-value:-3.643e+01
Information Content per bp:1.802
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.8 +/- 21.4bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:AGCKCTGATTGGCTGG-
-----TGATTGGCTANN
 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCKCTGATTGGCTGG
AGAGTGCTGATTGGTCCA
 A C G T A C G T T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AGCKCTGATTGGCTGG---
----CTGATTGGTCNATTT
 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCKCTGATTGGCTGG
-GCAGTGATTT-----
 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGCKCTGATTGGCTGG
----CCGATTGGCT--
 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCKCTGATTGGCTGG
TGCTGTGATTT-----
 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCKCTGATTGGCTGG
NNNNGTTGATTGGGTCG
 A C G T T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCKCTGATTGGCTGG
--CNGTGATTTN----
 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGCKCTGATTGGCTGG
----TTGATTGN----
 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGCKCTGATTGGCTGG
----BTGABTGACAGS
 T G C A A C T G A G T C A C T G A G T C A C G T A C T G C G T A A G C T A C G T A C T G A C T G A T G C A C G T A C T G A T C G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C