Information for 5-KGAACAGATGCCCMCA (Motif 6)

C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
Reverse Opposite:
A C G T A C T G C A T G A C T G C A T G A T C G A T G C G C T A A C G T A G T C A C G T A T C G A G C T A G C T A G T C G T C A
p-value:1e-12
log p-value:-2.956e+01
Information Content per bp:1.705
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.5 +/- 24.7bp
Average Position of motif in Background54.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:KGAACAGATGCCCMCA
--AACAGATGGC----
 C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--KGAACAGATGCCCMCA
GAAGAACAGGTGTCCG--
 A C G T A C G T C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KGAACAGATGCCCMCA
NGNGACAGCTGCN----
 A C G T C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:KGAACAGATGCCCMCA
--AACAGATGGT----
 C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KGAACAGATGCCCMCA
--AGCAGCTGCT----
 C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KGAACAGATGCCCMCA
--AACAGCTGCAG---
 C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KGAACAGATGCCCMCA
--GACAGCTGCAG---
 C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:KGAACAGATGCCCMCA
VNAVCAGCTGGC----
 C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:KGAACAGATGCCCMCA
NNVVCAGCTGBN----
 C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KGAACAGATGCCCMCA
--AGCAGCTGCTNN--
 C A G T C T A G C T G A C T G A T A G C C G T A C T A G G T C A C G A T A T C G A T G C G T A C A G T C G T A C G T A C G T C A
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T