Information for 9-AATAATAGTA (Motif 34)

C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.282e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.7 +/- 14.5bp
Average Position of motif in Background26.9 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AATAATAGTA
AATAATT---
 C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A
G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AATAATAGTA
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AATAATAGTA---
GCTAATTATAATTATC
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AATAATAGTA
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AATAATAGTA---
TATAATTATAATATTC
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATAATAGTA
CCAAAAATAG--
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AATAATAGTA---
TTTAATTATAATTAAG
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------AATAATAGTA-----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AATAATAGTA
GAACAATGG--
 A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATAATAGTA
DCYAAAAATAGM-
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T