Information for 17-GGAGTCATGGCTACCA (Motif 24)

A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T C G T A A C T G A T G C A G T C C G T A A C G T A C T G T C G A A G T C A C G T G T A C G T A C
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.786
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.5 +/- 9.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX4/MA0799.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTCATGGCTACCA
CGTTGCCATGGCAACN-
 A C G T A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G A C G T

JDP2/MA0655.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTCATGGCTACCA
ATGAGTCAT--------
 A C G T A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTCATGGCTACCA
GATGAGTCATN-------
 A C G T A C G T A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTCATGGCTACCA
GATGAGTCAT--------
 A C G T A C G T A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGTCATGGCTACCA
GTTGCCATGGCAACCG
 A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGTCATGGCTACCA
TGAGTCA---------
 A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGAGTCATGGCTACCA
GTTGCCATGGCAACM-
 A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C A C G T

RFX3/MA0798.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTCATGGCTACCA
CGTTGCCATGGCAACN-
 A C G T A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGTCATGGCTACCA
DATGASTCAT--------
 A C G T A C G T A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGAGTCATGGCTACCA
---GTCATN-------
 A C T G A C T G C G T A A C T G A G C T A G T C C G T A C G A T C T A G T A C G G T A C C G A T G T C A G T A C A G T C C G T A
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T