Information for 5-GSWGMACARCGCC (Motif 2)

A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A T G C A G T C
p-value:1e-15
log p-value:-3.658e+01
Information Content per bp:1.871
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 26.5bp
Average Position of motif in Background78.9 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GSWGMACARCGCC
-----AGCGCGCC
 A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GSWGMACARCGCC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GSWGMACARCGCC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GSWGMACARCGCC--
TCNCTTTACAGCGNNNT
 A C G T A C G T A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GSWGMACARCGCC
-----ACAAAG--
 A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GSWGMACARCGCC-----
--TCGACCCCGCCCCTAT
 A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GSWGMACARCGCC
--GGAACAAAGR-
 A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GSWGMACARCGCC------
--AGCTCGGCGCCAAAAGC
 A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GSWGMACARCGCC
--VRRACAAWGG-
 A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GSWGMACARCGCC------
--CCTTCGGCGCCAAAAGG
 A C T G T A C G C G A T A C T G T G A C C G T A A G T C C G T A C T A G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G