Information for 8-GAAGCATGTCMMT (Motif 10)

C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
Reverse Opposite:
C G T A A C G T A C G T A T C G C G T A A T G C G T C A A C G T A C T G A G T C A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.861
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.8 +/- 16.1bp
Average Position of motif in Background55.6 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAGCATGTCMMT
-AAGCTTG-----
 C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCATGTCMMT
NGAAGC--------
 A C G T C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAGCATGTCMMT
-AAGGATATNTN-
 C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAAGCATGTCMMT
AGGAAACAGCTG---
 A C G T A C G T C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAGCATGTCMMT
AAGGCAAGTGT--
 C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAAGCATGTCMMT--
---GSCTGTCACTCA
 C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAAGCATGTCMMT
----CCTGTCAA-
 C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAAGCATGTCMMT
--GTCATGTGACC
 C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAAGCATGTCMMT
---GCACGTAY--
 C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAAGCATGTCMMT
-AAYTAGGTCA--
 C T A G C G T A C G T A A C T G A G T C C G T A A C G T A T C G A C G T A T G C G T A C G T A C A C G T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T