Information for 3-GSCSGGGMAKSMACGT (Motif 8)

A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T
Reverse Opposite:
C G T A A T G C C T A G A C G T A C T G A T G C G T A C A C G T A C T G A T G C A G T C A G T C A T C G A C T G A T G C G T A C
p-value:1e-13
log p-value:-3.040e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.1 +/- 22.5bp
Average Position of motif in Background46.8 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GSCSGGGMAKSMACGT
ATGCCCGGGCATGT----
 A C G T A C G T A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GSCSGGGMAKSMACGT
WDNCTGGGCA-------
 A C G T A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:GSCSGGGMAKSMACGT-
---------BGCACGTA
 A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:GSCSGGGMAKSMACGT--
----------GCACGTNC
 A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:GSCSGGGMAKSMACGT--
----------GCACGTAY
 A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

Creb3l2/MA0608.1/Jaspar

Match Rank:6
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GSCSGGGMAKSMACGT--
---------GCCACGTGT
 A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.54
Offset:10
Orientation:forward strand
Alignment:GSCSGGGMAKSMACGT----
----------GCACGTACCC
 A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:GSCSGGGMAKSMACGT-
-----------CACGTG
 A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GSCSGGGMAKSMACGT---
---------GGCACGTGTC
 A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GSCSGGGMAKSMACGT---
---------NGCACGTGNT
 A C T G A T C G A G T C T A G C A C T G A C T G A T C G G T A C C G T A A C T G T A C G G T A C C G T A A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T