Information for 2-TTSAGTGCTGSGYRGT (Motif 7)

A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
Reverse Opposite:
C G T A A T G C A G T C C T G A A G T C A T G C A G T C C G T A A C T G A G T C C G T A A G T C A C G T T A C G C G T A C G T A
p-value:1e-13
log p-value:-3.040e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 23.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTSAGTGCTGSGYRGT
TTAAGTGCTT------
 A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTSAGTGCTGSGYRGT
CTYRAGTGSY-------
 A C G T A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTSAGTGCTGSGYRGT
TTRAGTGSYK------
 A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTSAGTGCTGSGYRGT
TTGAGTGSTT------
 A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTSAGTGCTGSGYRGT
BTBRAGTGSN-------
 A C G T A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTSAGTGCTGSGYRGT
CTTGAGTGGCT------
 A C G T A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTSAGTGCTGSGYRGT
NNNNTTGTGTGCTTNN----
 A C G T A C G T A C G T A C G T A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTSAGTGCTGSGYRGT
ANNCATTAATTGCTNGN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTSAGTGCTGSGYRGT
ANNCATTAATTGCTNGN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTSAGTGCTGSGYRGT
TTAAGTGC--------
 A C G T C G A T A T G C C G T A A C T G A C G T A C T G G T A C C G A T A C T G A T C G C T A G A G C T C T A G A T C G A C G T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T