Information for 14-CTCGCAGCCATCG (Motif 24)

A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G
Reverse Opposite:
G T A C A C T G G T C A A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 28.9bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTCGCAGCCATCG--
---GCCGCCATCTTG
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTCGCAGCCATCG--
---GCNGCCATCTTG
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCGCAGCCATCG
---BCAGACWA--
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTCGCAGCCATCG
----CAGCC----
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTCGCAGCCATCG
TGGCAGNCTGCCAG--
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCGCAGCCATCG
--CACAGN-----
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCGCAGCCATCG
--CGGAGC-----
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CTCGCAGCCATCG---
------GCCATCTGTT
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTCGCAGCCATCG--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTCGCAGCCATCG
-----TGCCAA--
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T