Information for 2-GAGTCATTTCCTT (Motif 2)

A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T
Reverse Opposite:
T C G A C T G A C T A G C A T G C G T A T C G A T C G A C A G T A T C G T C G A A G T C G A C T A T G C
p-value:1e-14
log p-value:-3.351e+01
Information Content per bp:1.659
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif227.0
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets53.5 +/- 28.6bp
Average Position of motif in Background47.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN(var.2)/MA0489.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCATTTCCTT
ATGAGTCATNTNNT-
 A C G T A C G T A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GAGTCATTTCCTT-
----CACTTCCTCT
 A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GAGTCATTTCCTT--
-----ATTTCCTGTN
 A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCATTTCCTT
TGAGTCATTTC---
 A C G T A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GAGTCATTTCCTT-
----CACTTCCTGT
 A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0012.1_Elf3_1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAGTCATTTCCTT---
---TTACTTCCTNGTN
 A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAGTCATTTCCTT
GTTTCACTTCCG-
 A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GAGTCATTTCCTT--
-----ACTTCCTGNT
 A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GAGTCATTTCCTT--
---NNAYTTCCTGHN
 A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAGTCATTTCCTT-
----CACTTCCTGT
 A T C G C T G A T A C G A C G T A T G C G T C A A G C T A G C T G A C T G A T C A G T C A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T