Information for 8-GGGCCGCAGAGGCCAG (Motif 17)

A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
Reverse Opposite:
A G T C A C G T A C T G A C T G A G T C A G T C C G A T A G T C A C G T A T C G A G T C A C T G A C T G A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.119e+01
Information Content per bp:1.881
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 27.5bp
Average Position of motif in Background38.5 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGCCGCAGAGGCCAG
GGTCANYTGAGGWCA-
 A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGGCCGCAGAGGCCAG
------CAAAGGTCAG
 A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGGCCGCAGAGGCCAG
AAGGTCACGAAAGGTCA-
 A C G T A C G T A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
C T G A T C G A A T C G A C T G A C G T G T A C T C G A G T A C A T C G T C G A T C G A T C G A A C T G A C T G G C A T G A T C T C G A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGGCCGCAGAGGCCAG
GGGGCCCAAGGGGG---
 A C G T A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGGCCGCAGAGGCCAG
GTGGGCCCCA--------
 A C G T A C G T A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGGCCGCAGAGGCCAG
--GGGGCCGAGGCCTG
 A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGGCCGCAGAGGCCAG
-GTCCCCAGGGGA---
 A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GGGCCGCAGAGGCCAG
-------AGRGGTCA-
 A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGGCCGCAGAGGCCAG
-TGCCCTNAGGGCA--
 A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GGGCCGCAGAGGCCAG--
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C T G A C T G A C T G A G T C G T A C C T A G A T G C C G T A A C T G C G T A A C T G A C T G G T A C G T A C G T C A T C A G A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G