Information for 5-CGGTGCTGGCCAG (Motif 10)

G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G T C A G A G T C A G T C C T G A A T C G A T G C C G T A A T G C A T G C A C T G
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.824
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.8 +/- 27.5bp
Average Position of motif in Background65.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGTGCTGGCCAG
--WDNCTGGGCA-
 G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGTGCTGGCCAG
AGGTGNCAGACAG
 G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

ZBTB7A/MA0750.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGCTGGCCAG
TCGGTGGTCGCN--
 A C G T G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CGGTGCTGGCCAG
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGTGCTGGCCAG
AGGTCAAGGTCA-
 G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGGTGCTGGCCAG
----NGTGGGCAT
 G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGTGCTGGCCAG-----
VCAKCTGGNNNCCAGMTGBN
 A C G T A C G T G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGGTGCTGGCCAG---
CGCGCCGGGTCACGTA
 G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGGTGCTGGCCAG
TCACCTCTGGGCAG
 A C G T G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------CGGTGCTGGCCAG
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A T C G A T C G A C G T A T C G A T G C A G C T A C T G A C T G A G T C A G T C C G T A A C T G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T