p-value: | 1e-3 |
log p-value: | -8.704e+00 |
Information Content per bp: | 1.938 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 1.12% |
Number of Background Sequences with motif | 5.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 47.5 +/- 30.0bp |
Average Position of motif in Background | 43.6 +/- 29.5bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 3.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCAGCCACACAGG -CRCCCACGCA-- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGCCACACAGG-- SCAGYCADGCATGAC |
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GLI2/MA0734.1/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGCCACACAGG GCGACCACACTG- |
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RUNX1/MA0002.2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCAGCCACACAGG -AAACCACAGAN- |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCAGCCACACAGG --AGCCACTCAAG |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GCAGCCACACAGG -------CACAGN |
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RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGCCACACAGG NWAACCACADNN- |
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RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAGCCACACAGG -AAACCACANN-- |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGCCACACAGG--- GCAGCCAAGCGTGACN |
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Sox2/MA0143.3/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GCAGCCACACAGG -----AACAAAGG |
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