Information for 2-TKGCTCCTGCWAT (Motif 6)

A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T
Reverse Opposite:
C G T A A G C T C G T A A C T G A T G C C G T A A C T G A C T G C G T A A C T G A T G C G T C A C G T A
p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.4 +/- 11.6bp
Average Position of motif in Background61.4 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TKGCTCCTGCWAT
SNGCACCTGCHS-
 A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TKGCTCCTGCWAT
--GCTCCG-----
 A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TKGCTCCTGCWAT-
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TKGCTCCTGCWAT
-CGCACCTGCT--
 A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TKGCTCCTGCWAT-
--CCCCCTGCTGTG
 A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TKGCTCCTGCWAT
-NNCACCTGNN--
 A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TKGCTCCTGCWAT
-TACACCTGTC--
 A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TKGCTCCTGCWAT
-AACACCTGCT--
 A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TKGCTCCTGCWAT
--NCACCTGTN--
 A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TKGCTCCTGCWAT-
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A G T C A G T C A C G T A T C G A G T C C G A T C T G A A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T