Information for 2-GSMTGRAGYTGGGKKA (Motif 3)

A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
Reverse Opposite:
A G C T G T C A G T A C A G T C A G T C A G T C C G T A C T G A A G T C A C G T A G T C A G T C C G T A A C G T A T G C A G T C
p-value:1e-10
log p-value:-2.320e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.5 +/- 20.0bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0107.1_Ascl2_2/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GSMTGRAGYTGGGKKA-
-NATNGGGNGGGGANAN
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A A C G T
A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GSMTGRAGYTGGGKKA----
----AGAGCGGGGTCAAGTA
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GSMTGRAGYTGGGKKA
---CGCAGCTGCG---
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GSMTGRAGYTGGGKKA
----GCAGCTGTNN--
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:GSMTGRAGYTGGGKKA
---NGAAGC-------
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GSMTGRAGYTGGGKKA
--GTGGGGGAGGGG--
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.48
Offset:6
Orientation:forward strand
Alignment:GSMTGRAGYTGGGKKA
------AAYTAGGTCA
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GSMTGRAGYTGGGKKA
CACGGCAGTTGGTNN-
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:GSMTGRAGYTGGGKKA
--CAGCAGCTGN----
 A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GSMTGRAGYTGGGKKA
GRTGMTRGAGCC------
 A C G T A C G T A C T G A T C G G T C A A C G T A C T G C T A G G T C A A C T G A G C T A C G T A C T G A C T G A C T G A C T G C A G T C T G A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T