Information for 1-AAVACAGVGCCCTGAG (Motif 1)

C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T C A A C T G C T A G A C T G A G T C A C G T A T G C A C G T A C T G A G C T A C G T A G C T C G A T
p-value:1e-11
log p-value:-2.636e+01
Information Content per bp:1.798
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 23.3bp
Average Position of motif in Background38.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AAVACAGVGCCCTGAG--
------ATGCCCTGAGGC
 C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AAVACAGVGCCCTGAG--
------WTGSCCTSAGGS
 C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AAVACAGVGCCCTGAG
--CACAGN--------
 C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AAVACAGVGCCCTGAG
-GGACACACCCCC---
 C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AAVACAGVGCCCTGAG
TTTGCACACGGCAC----
 A C G T A C G T C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.48
Offset:11
Orientation:reverse strand
Alignment:AAVACAGVGCCCTGAG-
-----------CGGAGC
 C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.47
Offset:6
Orientation:forward strand
Alignment:AAVACAGVGCCCTGAG--
------GTCCCCAGGGGA
 C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--AAVACAGVGCCCTGAG
TGTAAACAGGA-------
 A C G T A C G T C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----AAVACAGVGCCCTGAG
TCNNTTTACAGCGNNNT---
 A C G T A C G T A C G T A C G T C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----AAVACAGVGCCCTGAG
TCNNTTTACAGCGNNNT---
 A C G T A C G T A C G T A C G T C G T A C T G A T C G A C T G A A G T C C G T A A T C G T G C A C T A G A G T C A G T C A G T C A C G T A C T G C G T A A C T G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T