Information for 1-GCCTVGAVCTCCC (Motif 4)

A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G C T G A A C T G A G T C A G C T A G T C A G T C C G T A C T A G A T C G A G T C
p-value:1e-7
log p-value:-1.840e+01
Information Content per bp:1.803
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.5 +/- 23.5bp
Average Position of motif in Background30.0 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCTVGAVCTCCC-
TGCCTGCGYCMCCTT
 A C G T A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCTVGAVCTCCC----
-TATCGACCCCCCACAG
 A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCCTVGAVCTCCC
-GCTCGGSCTC--
 A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTVGAVCTCCC
TGACCTTGACCT---
 A C G T A C G T A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCTVGAVCTCCC---
----GGACCACCCACG
 A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCTVGAVCTCCC
---CNGTCCTCCC
 A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCTVGAVCTCCC
NGNTCTAGAACCNGV
 A C G T A C G T A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCTVGAVCTCCC
TGACCTTGACCT---
 A C G T A C G T A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCTVGAVCTCCC--
---GCGACCACCGAA
 A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCCTVGAVCTCCC
GCTGACCTTGAACTN--
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C G T T A C G A C T G C T G A T C A G A G T C A G C T A G T C A G T C G T A C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T