Information for 3-GYATKAGGYYWKGGGT (Motif 3)

A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C G T C A C G A T C T G A C T A G A T G C A G T C A C G T G T A C C G T A A C G T C T A G A G T C
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.845
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 35.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC/MA0648.1/Jaspar

Match Rank:1
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GYATKAGGYYWKGGGT
NNGGATTAGN--------
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GYATKAGGYYWKGGGT--
----GAGGTCAAAGGTCA
 A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GYATKAGGYYWKGGGT
GNGGATTAGN--------
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GYATKAGGYYWKGGGT--
---AGGGGTCAGAGGTCA
 A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

JUN/MA0488.1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GYATKAGGYYWKGGGT
AAGATGATGTCAT----
 A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GYATKAGGYYWKGGGT--
------TGTCAGGGGGCG
 A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GYATKAGGYYWKGGGT-------
------GGCGAGGGGTCAAGGGC
 A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GYATKAGGYYWKGGGT
TGCCTGAGGCN------
 A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GYATKAGGYYWKGGGT
NGCCTNAGGCN------
 A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GYATKAGGYYWKGGGT
-----AGGCCTNG---
 A C T G A G T C C G T A A C G T A C T G C G T A A C T G A T C G G A C T A G C T G C A T A C G T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T