Information for 6-TTGTCTTGCATTG (Motif 8)

A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
Reverse Opposite:
G T A C G T C A C G T A A G C T A C T G A G T C C G T A C G T A A T C G C G T A A T G C C T G A C G T A
p-value:1e-7
log p-value:-1.700e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif54.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets65.9 +/- 24.2bp
Average Position of motif in Background58.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCTTGCATTG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGTCTTGCATTG
-GGTCTGGCAT--
 A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCTTGCATTG
NNTTTTGTTTTGATNT-
 A C G T A C G T A C G T A C G T A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGTCTTGCATTG---
NNNTATTGAATTGNNN
 A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0106.1_Arid5a_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTCTTGCATTG
TNNTTTCGTATTNNANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTGTCTTGCATTG
CCATTGTTTT------
 A C G T A C G T A C G T A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCTTGCATTG
TNTTATCTTATCTT-
 A C G T A C G T A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTGTCTTGCATTG
CTGTCTGG-----
 A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTGTCTTGCATTG
TWGTCTGV-----
 A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTGTCTTGCATTG
VBSYGTCTGG-----
 A C G T A C G T A C G T A G C T A T C G A C G T A T G C A C G T C G A T A C T G G T A C T C G A A C G T A C G T A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T