Information for 4-CRGGATCNTG (Motif 15)

A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G
Reverse Opposite:
A G T C C G T A G C T A A C T G C G T A C G A T A G T C A G T C A G T C A C T G
p-value:1e-4
log p-value:-1.109e+01
Information Content per bp:1.805
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif228.0
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets37.5 +/- 21.5bp
Average Position of motif in Background52.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.71
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CRGGATCNTG
ANCAGGATGT--
 A C G T A C G T A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CRGGATCNTG----
BCNGGTTCTAGANCN
 A C G T A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CRGGATCNTG
-NGGATTAN-
 A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CRGGATCNTG-
-GGGTACGTGC
 A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CRGGATCNTG
NRRGGGTCTT-
 A C G T A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CRGGATCNTG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CRGGATCNTG-
---GGACGTGC
 A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CRGGATCNTG
GGGCGGGACC---
 A C G T A C G T A C G T A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CRGGATCNTG------
-RGSMTBCTGGGAAAT
 A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CRGGATCNTG
TTCAAGGTCAT-
 A C G T A C G T A G T C C T A G C T A G A C T G C G T A C G A T A G T C C A G T A C G T A C T G
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T