Information for 7-ACTGCTGAGCTGCCCG (Motif 13)

C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
Reverse Opposite:
A G T C C A T G A C T G A C T G A T G C C G T A A T C G A G T C A C G T A G T C C G T A A C T G A G T C C G T A A T C G A G C T
p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.926
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.3 +/- 19.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACTGCTGAGCTGCCCG
AATTTGCTGAC-------
 A C G T A C G T C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTGAGCTGCCCG
AAAWWTGCTGACWWD----
 A C G T A C G T A C G T C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTGAGCTGCCCG
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTGAGCTGCCCG
CCCCCTGCTGTG-------
 A C G T A C G T A C G T C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACTGCTGAGCTGCCCG
CCTGCTGAGH------
 C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ACTGCTGAGCTGCCCG
NAAAANTGCTGACTCAGC--
 A C G T A C G T A C G T A C G T C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTGCTGAGCTGCCCG
AAAATGCTGACT------
 A C G T A C G T C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCTGAGCTGCCCG
AAANTGCTGACTNAG---
 A C G T A C G T C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTGAGCTGCCCG
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.55
Offset:9
Orientation:forward strand
Alignment:ACTGCTGAGCTGCCCG--
---------CTGCCCGCA
 C T G A A T G C A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T G C A C G T A T C G A G T C A G T C G A T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A