Information for 8-AGCCGGCCCGTTGCTG (Motif 29)

C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G G T A C G T C A C T G A A T G C C T A G A C T G A C T G A G T C A G T C A C T G A T C G A G T C C G A T
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 21.0bp
Average Position of motif in Background34.6 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AGCCGGCCCGTTGCTG-----
------NCCGTTGCTANGNGN
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AGCCGGCCCGTTGCTG
-----GGCVGTTR---
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGCCGGCCCGTTGCTG
AGCGCGCC--------
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGCCGGCCCGTTGCTG--
----GACCCCCCGCTGTG
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AGCCGGCCCGTTGCTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGCCGGCCCGTTGCTG---
----GGCCYCCTGCTGDGH
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGCCGGCCCGTTGCTG
----TGGCAGTTGG--
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G
A C G T A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:AGCCGGCCCGTTGCTG-----
------NNCGTTGCTATGGNN
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:AGCCGGCCCGTTGCTG
-ANCCACCTGTTGCNC
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G
A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:AGCCGGCCCGTTGCTG
-GACCCCCCGCTGTGC
 C G T A A C T G A T G C A G T C C T A G A C T G A G T C A G T C A G T C A T C G A G C T A C G T A C T G A T G C A C G T A C T G
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C