Information for 19-GGTAACTGCAGGC (Motif 28)

A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G A T G C G T C A A C T G C G A T A C G T G T C A A G T C A G T C
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 21.9bp
Average Position of motif in Background71.0 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTAACTGCAGGC
GGGAATTGTAGT-
 A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGTAACTGCAGGC--
-------CNAGGCCT
 A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGTAACTGCAGGC
--DCTCAGCAGG-
 A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTAACTGCAGGC--
GGGTTACTANAGGTCA
 A C G T A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGTAACTGCAGGC---------
--------CAGGCCNNGGCCNN
 A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGTAACTGCAGGC--
-------CTAGGCCT
 A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGTAACTGCAGGC--
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGTAACTGCAGGC-
AAGGKGRCGCAGGCA
 A C G T A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GGTAACTGCAGGC----
-------CCAGACRSVB
 A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GGTAACTGCAGGC--
-------CCAGACAG
 A C T G C T A G C A G T C G T A C G T A G T A C A C G T A T C G A G T C C G T A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G