Information for 18-TGAAGCTGAATGA (Motif 27)

A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A
Reverse Opposite:
G A C T A G T C G T C A A G C T A C G T G A T C C G T A C A T G A G T C C G A T C G A T A G T C C G T A
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.813
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 17.8bp
Average Position of motif in Background59.5 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGAAGCTGAATGA-----
--ACTATGAATGAATGAT
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGAAGCTGAATGA-
--ATGATKGATGRC
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGAAGCTGAATGA
---TGATTGATGA
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGAAGCTGAATGA--
---TGATTRATGGCY
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGAAGCTGAATGA
---TGCTGAGTCA
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A
A C G T A C G T A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGAAGCTGAATGA
---TGCTGACTCA
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGAAGCTGAATGA-
--HTGCTGAGTCAT
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A A C G T
A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGAAGCTGAATGA--
---TGCTGAGTCATC
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGAAGCTGAATGA-----
--NNAATTAATGACCNNN
 A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGAAGCTGAATGA-
ATGAATATTCATGAG
 A C G T A C G T A C T G C G T A C G T A A C T G G A T C C G A T C A T G G T C A C T G A A C G T A C T G C T G A A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G