Information for 13-CTCAATTACA (Motif 25)

A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
Reverse Opposite:
C G A T A C T G A G C T G C T A C T G A C G A T A C G T C T A G C G T A C T A G
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.856
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif110.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets51.5 +/- 24.9bp
Average Position of motif in Background50.3 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX1/MA0666.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-CCAATTAG-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T

Msx3/MA0709.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-CCAATTAA-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-CCAATTAC-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T

DLX6/MA0882.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-CCAATTAC-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-CCAATTAC-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-CCAATTAA-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

ALX3/MA0634.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTCAATTACA
TCTAATTAAA
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

UNCX/MA0721.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-CTAATTAA-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-GCAATTAA-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTCAATTACA
-CCAATTAA-
 A G T C C G A T A G T C C G T A C G T A G A C T C G A T C T G A A G T C C G T A
A C G T A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A A C G T