p-value: | 1e-10 |
log p-value: | -2.376e+01 |
Information Content per bp: | 1.640 |
Number of Target Sequences with motif | 61.0 |
Percentage of Target Sequences with motif | 7.00% |
Number of Background Sequences with motif | 1280.9 |
Percentage of Background Sequences with motif | 2.71% |
Average Position of motif in Targets | 50.5 +/- 22.7bp |
Average Position of motif in Background | 49.0 +/- 31.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.04 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GYWGGCAAKT CTTGGCAA-- |
|
|
|
SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GYWGGCAAKT-- -AAGGCAAGTGT |
|
|
|
NFIA/MA0670.1/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GYWGGCAAKT GGTGCCAAGT |
|
|
|
NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GYWGGCAAKT CGTGCCAAG- |
|
|
|
NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GYWGGCAAKT --TGCCAA-- |
|
|
|
MEIS2/MA0774.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GYWGGCAAKT GCTGTCAA-- |
|
|
|
PB0145.1_Mafb_2/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GYWGGCAAKT- ANATTTTTGCAANTN |
|
|
|
MEIS3/MA0775.1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GYWGGCAAKT CCTGTCAA-- |
|
|
|
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GYWGGCAAKT --TGTCANYT |
|
|
|
MSX2/MA0708.1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GYWGGCAAKT-- ----CCAATTAA |
|
|
|