Information for 4-CAGGAGGCAGAGCAGA (Motif 4)

A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T C G A G T C G T A C A C G T A G T C A T G C A C G T A T C G
p-value:1e-15
log p-value:-3.608e+01
Information Content per bp:1.851
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.7 +/- 25.0bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGGAGGCAGAGCAGA-
--TGACANARRCCAGRC
 A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A A C G T
A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAGGAGGCAGAGCAGA
---GAGSCCGAGC---
 A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGGAGGCAGAGCAGA-
--AGAGRRACAGCWGAC
 A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A A C G T
A C G T A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

ZNF263/MA0528.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGGAGGCAGAGCAGA----
GGAGGAGGAGGGGGAGGAGGA
 A C G T A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGGAGGCAGAGCAGA
-RGKGGGCGGAGC---
 A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAGGCAGAGCAGA
ANCAGGATGT--------
 A C G T A C G T A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAGGCAGAGCAGA
NDCAGGAARTNN------
 A C G T A C G T A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAGGAGGCAGAGCAGA
AACAGGAAGT--------
 A C G T A C G T A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CAGGAGGCAGAGCAGA
ACAGGAAGTG-------
 A C G T A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAGGAGGCAGAGCAGA
-AGGGGGCGGGGCTG-
 A T G C C G T A A T C G A C T G C G T A A C T G C T A G A T G C C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T G A
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T