Information for 7-AATTCAATTA (Motif 16)

C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A
Reverse Opposite:
C G A T T G C A C G T A G A C T C A G T A T C G T G C A G T C A C A G T G C A T
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.665
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif264.4
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets51.2 +/- 23.8bp
Average Position of motif in Background50.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Phox2b/MA0681.1/Jaspar

Match Rank:1
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AATTCAATTA
TAATTTAATTA
 A C G T C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AATTCAATTA
TAATTTAATTA
 A C G T C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AATTCAATTA
TAATTTAATTA
 A C G T C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:4
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--AATTCAATTA
NTAATBNAATTA
 A C G T A C G T C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-AATTCAATTA-
TAATYNRATTAR
 A C G T C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A A C G T
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----AATTCAATTA--
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AATTCAATTA-
TAATCHGATTAC
 A C G T C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A A C G T
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

ALX3/MA0634.1/Jaspar

Match Rank:8
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AATTCAATTA--
--TCTAATTAAA
 C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A A C G T A C G T
A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AATTCAATTA
TAATCAATTA
 C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

DUX4/MA0468.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AATTCAATTA
TAATTTAATCA
 A C G T C G T A G T C A C A G T A C G T T A G C G T C A C T G A C G A T A C G T G C T A
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A