Information for 8-TMACAGYYCAGSRYCT (Motif 7)

A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G C T A G A G T C A T C G A G T C A C G T A C T G C T G A C T A G A G T C A G C T A C T G A C G T A C T G C T G A
p-value:1e-8
log p-value:-1.920e+01
Information Content per bp:1.837
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 26.4bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TMACAGYYCAGSRYCT
-CACAGN---------
 A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TMACAGYYCAGSRYCT
TCCCAGMCRAGCCCC-
 A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TMACAGYYCAGSRYCT
GATATTGACAGCTGCGT----
 A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TMACAGYYCAGSRYCT
-CAAAGGTCAG-----
 A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TMACAGYYCAGSRYCT
CANAGNNCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TMACAGYYCAGSRYCT
TTGACAGC---------
 A C G T A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TMACAGYYCAGSRYCT
TCNNTTTACAGCGNNNT----
 A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TMACAGYYCAGSRYCT
TCNNTTTACAGCGNNNT----
 A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TMACAGYYCAGSRYCT
GGGGTCAAAGTCCAAT----
 A C G T A C G T A C G T A C G T A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TMACAGYYCAGSRYCT
AGAGTCCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A G T C C T G A A C T G A G T C A G C T A G T C C G T A A C T G T A G C C T A G A G T C A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T