Information for 5-AGCTCCATAA (Motif 5)

C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A
Reverse Opposite:
C G A T C G A T C G T A A C G T A C T G C T A G C T G A C T A G A G T C A C G T
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.843
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif50.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets57.8 +/- 30.9bp
Average Position of motif in Background52.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCTCCATAA--
GGCTCYAKCAYC
 C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCTCCATAA
-GCTCCG---
 C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCTCCATAA
GTCCGCCATTA
 A C G T C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCTCCATAA-
-VTTRCATAAY
 C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A A C G T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCTCCATAA--
---GCAATAAAA
 C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCTCCATAA----
--NGYCATAAAWCH
 C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

NFIL3/MA0025.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCCATAA
ANGTTACATAA
 A C G T C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCTCCATAA--
AGGTCTCTAACC
 C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGCTCCATAA--
--CCYMATAAAA
 C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A A C G T A C G T
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCCATAA
TAATTTGCATAA
 A C G T A C G T C G T A T C A G A G T C G A C T A G T C A G T C G T C A C G A T C G T A C G T A
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A