Information for 5-GTGATTGGCA (Motif 16)

T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A
Reverse Opposite:
C G A T A T C G T A G C G A T C G T C A C T G A C G A T T A G C G T C A A T G C
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.663
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif11.62%
Number of Background Sequences with motif2496.1
Percentage of Background Sequences with motif5.34%
Average Position of motif in Targets50.8 +/- 26.1bp
Average Position of motif in Background51.3 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GTGATTGGCA--
BTGABTGACAGS
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTGATTGGCA--
NTGATTGACAGN
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GTGATTGGCA--
---NTTGGCANN
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GTGATTGGCA
----TTGGCA
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTGATTGGCA--
--NNTTGGCANN
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTGATTGGCA---
-TGATTGGCTANN
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTGATTGGCA-
--GGTTGGCAT
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGATTGGCA-----
CTGATTGGTCNATTT
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A A C G T A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTGATTGGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGATTGGCA
CCGATTGGCT
 T A C G C A G T A T C G G C T A G A C T C A G T C T A G A T C G T A G C G C T A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T