Information for 5-GATTTATTAGATA (Motif 8)

A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
Reverse Opposite:
A G C T C G T A A G C T A T G C A C G T T C G A C G T A A G C T G C T A C G T A C G T A A G C T T A G C
p-value:1e-13
log p-value:-3.101e+01
Information Content per bp:1.822
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets60.7 +/- 24.9bp
Average Position of motif in Background58.1 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa9/MA0594.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATTAGATA
TGATTTATGGC---
 A C G T A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATTAGATA
TGATTGATGA----
 A C G T A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GATTTATTAGATA
-TTTTATTRGN--
 A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GATTTATTAGATA
--NTAATGAGCT-
 A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GATTTATTAGATA
AATTAATTAGT--
 A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GATTTATTAGATA--
CGAATTAATTAAATACT
 A C G T A C G T A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GATTTATTAGATA--
GACGATAATGAGCTTGC
 A C G T A C G T A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTTATTAGATA
ATGATKGATGRC---
 A C G T A C G T A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATTTATTAGATA
-TTTTATKRGG--
 A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GATTTATTAGATA
NTTTTATTGG---
 A C T G C T G A A C G T A C G T C A G T C T G A A C G T A C G T C G T A A T C G C T G A A C G T C T G A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T