Information for 12-GSCAGSTCMY (Motif 23)

T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C
Reverse Opposite:
C T A G C A G T A C T G G T C A T A C G T A G C G A C T A C T G A T C G A G T C
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.613
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif874.6
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets55.3 +/- 28.5bp
Average Position of motif in Background49.5 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB3/MA0638.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GSCAGSTCMY--
GTGCCACGTCATCA
 A C G T A C G T T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C A C G T A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GSCAGSTCMY--
ATGCCACGTCATCA
 A C G T A C G T T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C A C G T A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GSCAGSTCMY-
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A C G T T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GSCAGSTCMY-
AATGCCACGTCATC
 A C G T A C G T A C G T T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GSCAGSTCMY
---AGGTCA-
 T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GSCAGSTCMY--
ACCACATCCTGT
 T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C A C G T A C G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GSCAGSTCMY-
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GSCAGSTCMY
--AAGGTCAC
 T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GSCAGSTCMY-
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T A C G T T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GSCAGSTCMY--
GCCAGCTGBTNB
 T C A G T A G C T G A C C T G A A T C G A T G C A C G T T G A C G T C A G A T C A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C