Information for 13-AGTGAGGCAAGCT (Motif 21)

C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G A G T C G C A T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.119e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 21.2bp
Average Position of motif in Background55.3 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGTGAGGCAAGCT-
---AAGGCAAGTGT
 C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTGAGGCAAGCT
--TGAGTCA----
 C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGAGGCAAGCT
GGTGACTCATG--
 C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGAGGCAAGCT
NATGTTGCAA---
 C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTGAGGCAAGCT
GGTGACTCATC--
 C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTGAGGCAAGCT
GGATGACTCAT---
 A C G T C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T A C G T A C G T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGTGAGGCAAGCT
NATGASTCABNN-
 C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTGAGGCAAGCT
SCAGYCADGCATGAC
 A C G T A C G T C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTGAGGCAAGCT
-NTGAGTCATCN-
 C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T
A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGTGAGGCAAGCT-
-------CAAGCTT
 C G T A A C T G C G A T A C T G C G T A A C T G C T A G A G T C C G T A C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T