Information for 12-GTCTCTCTGGGCC (Motif 20)

C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A G T C A G T C C G T A A C T G C T G A C T A G C G T A A T C G C T G A A G T C
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.862
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.3 +/- 24.5bp
Average Position of motif in Background40.6 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GTCTCTCTGGGCC
---WDNCTGGGCA
 C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GTCTCTCTGGGCC-
------CTAGGCCT
 C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCTCTCTGGGCC
--CTGTCTGG---
 C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTCTGGGCC-
NNTCCTGCTGTGNNN
 A C G T C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTCTCTCTGGGCC-
--TCCCCTGGGGAC
 C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C A C G T
A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTCTCTCTGGGCC
VBSYGTCTGG---
 C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTCTGGGCC-
TCNCCTGCTGNGNNN
 A C G T C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTCTCTCTGGGCC-
-----TNNGGGCAG
 C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTCTCTCTGGGCC
--CCTGCTGAGH-
 C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTCTGGGCC--
NNTNNTGTCTGGNNTNG
 A C G T A C G T C T A G A G C T A T G C A C G T A G T C A G C T A G T C C G A T A C T G A C T G A C T G A G T C A T G C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G