Information for 11-GAWTGKGGCCAKW (Motif 19)

A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
Reverse Opposite:
C G A T G T A C A C G T C T A G A C T G G T A C G T A C G T C A A G T C C G T A G C A T A C G T A G T C
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.854
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.8 +/- 16.2bp
Average Position of motif in Background53.9 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD1/MA0090.2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAWTGKGGCCAKW
NTGGAATGTG------
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAWTGKGGCCAKW
NTGGAATGTN------
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GAWTGKGGCCAKW
NTTNTATGAATGTGNNC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAWTGKGGCCAKW
-TTTGGCGCCAAA
 A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAWTGKGGCCAKW
NTGGGTGTGGCC---
 A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAWTGKGGCCAKW-
TGACANARRCCAGRC
 A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAWTGKGGCCAKW--
AAAATGGCGCCATTTT
 A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAWTGKGGCCAKW
TGGGTGTGGC----
 A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAWTGKGGCCAKW
NNHTGTGGTTWN-
 A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAWTGKGGCCAKW
MKGGGYGTGGCC---
 A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A C A T G C G T A
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T