Information for 10-CACGAGGCAA (Motif 18)

A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
Reverse Opposite:
A G C T A C G T A T C G A G T C A G T C C G A T A G T C C T A G C G A T A C T G
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.855
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif33.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets52.5 +/- 19.5bp
Average Position of motif in Background48.6 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Creb3l2/MA0608.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACGAGGCAA
ACACGTGGC--
 A C G T A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACGAGGCAA
CACGTGGC--
 A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CACGAGGCAA
CACGTGGN--
 A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CACGAGGCAA
GGTCACGTGG---
 A C G T A C G T A C G T A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACGAGGCAA
GGCACGTGCC--
 A C G T A C G T A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACGAGGCAA
GTCACGTGGM--
 A C G T A C G T A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACGAGGCAA
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACGAGGCAA
NNCCACGTGG---
 A C G T A C G T A C G T A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CACGAGGCAA
CACGTGDC--
 A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACGAGGCAA
GGCACGTGNC--
 A C G T A C G T A G T C C G T A A G T C T C A G C G T A A C T G C T A G A T G C G T C A C T G A
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T