Information for 8-CCCVAGGGCATTT (Motif 12)

A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
Reverse Opposite:
C G T A C T G A C T G A C G A T A C T G A G T C A G T C A G T C A C G T A C T G A C T G A C T G A C T G
p-value:1e-12
log p-value:-2.866e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.1 +/- 24.2bp
Average Position of motif in Background54.2 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CCCVAGGGCATTT
TTGCCCTAGGGCAT--
 A C G T A C G T A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CCCVAGGGCATTT
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CCCVAGGGCATTT
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CCCVAGGGCATTT
GCCTCAGGGCAT--
 A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCCVAGGGCATTT
TGCCCCCGGGCA---
 A C G T A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCVAGGGCATTT
ATTCCCAAGGGAAT--
 A C G T A C G T A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCCVAGGGCATTT
SCCTSAGGSCAW--
 A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCCVAGGGCATTT
TCCCCTGGGGAC--
 A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCCVAGGGCATTT
TGCCCNNAGGGCA---
 A C G T A C G T A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCCVAGGGCATTT
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A G T C A G T C G T A C T A G C G T C A A C T G A C T G A C T G G T A C C G T A A G C T A G C T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T