Information for 1-TNTAATTWAATTA (Motif 1)

G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A
Reverse Opposite:
C G A T C T G A C G T A A C G T A G C T C G A T T C G A C T G A C G A T G A C T C G T A C T A G C T G A
p-value:1e-51
log p-value:-1.194e+02
Information Content per bp:1.576
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif14.20%
Number of Background Sequences with motif1147.0
Percentage of Background Sequences with motif2.53%
Average Position of motif in Targets52.7 +/- 23.6bp
Average Position of motif in Background48.6 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:forward strand
Alignment:TNTAATTWAATTA
-YTAATYNRATTA
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A
A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.94
Offset:2
Orientation:forward strand
Alignment:TNTAATTWAATTA
--TAATTTAATTA
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:TNTAATTWAATTA
--TAATTAAATTA
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A
A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:4
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:TNTAATTWAATTA-
--TAATTNVATTAN
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A A C G T
A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:TNTAATTWAATTA
--TAATTAAATTA
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A
A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.88
Offset:2
Orientation:forward strand
Alignment:TNTAATTWAATTA-
--TAATCHGATTAC
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A A C G T
A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

DUXA/MA0884.1/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TNTAATTWAATTA-
-NTGATTAAATTAN
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A A C G T
A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

DUX4/MA0468.1/Jaspar

Match Rank:8
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TNTAATTWAATTA
--TAATTTAATCA
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A
A C G T A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TNTAATTWAATTA
-YTAATTAVHT--
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A
A C G T A G T C G A C T T C G A C G T A A C G T A C G T C T G A T C G A G C A T G C A T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TNTAATTWAATTA--
NWTGATTRGRTTAWN
 G A C T G A T C G C A T C T G A C G T A G A C T A G C T G C T A T C G A T G C A C G A T G A C T G C T A A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C