Information for 3-CTGCTVDGCCAGCGGA (Motif 5)

A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A
Reverse Opposite:
A G C T A G T C G T A C A C T G G T A C A C G T C T A G A C T G G T A C G T A C A G T C C G T A A C T G A G T C C G T A A C T G
p-value:1e-19
log p-value:-4.439e+01
Information Content per bp:1.790
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 30.5bp
Average Position of motif in Background38.4 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGCTVDGCCAGCGGA
-TGCTGASTCAGC---
 A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A
A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTVDGCCAGCGGA
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CTGCTVDGCCAGCGGA--
--------HCAGCTGDTN
 A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CTGCTVDGCCAGCGGA--
--------CCAGCTGTTN
 A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTVDGCCAGCGGA
CCCCCTGCTGTG--------
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG/MA0659.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGCTVDGCCAGCGGA--
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTGCTVDGCCAGCGGA-
-----VNAVCAGCTGGC
 A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CTGCTVDGCCAGCGGA-
-------TCCAGATGTT
 A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCTVDGCCAGCGGA
NAAAANTGCTGACTCAGC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CTGCTVDGCCAGCGGA
GGCCYCCTGCTGDGH-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C A C G T T C A G C A T G A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C T G C T G A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T