Information for 4-GSCCATCTGT (Motif 4)

C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T
Reverse Opposite:
T G C A A T G C G C T A A C T G G T C A C G A T A C T G C T A G A T G C G A T C
p-value:1e-20
log p-value:-4.666e+01
Information Content per bp:1.726
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.01%
Number of Background Sequences with motif675.1
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets48.8 +/- 23.2bp
Average Position of motif in Background47.8 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.93
Offset:1
Orientation:forward strand
Alignment:GSCCATCTGT-
-GCCATCTGTT
 C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.91
Offset:1
Orientation:forward strand
Alignment:GSCCATCTGT-
-ACCATCTGTT
 C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---GSCCATCTGT----
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GSCCATCTGT-
-RCCATMTGTT
 C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T
A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GSCCATCTGT---
-GCCAGCTGBTNB
 C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:6
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GSCCATCTGT-
CGACCATCTGTT
 A C G T C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GSCCATCTGT
--CCATATGT
 C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GSCCATCTGT---
-NVCAGCTGBBNN
 C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GSCCATCTGT--
--CCAGCTGTTN
 C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GSCCATCTGT-
---CAGCTGNT
 C T A G T A C G G A T C G T A C C G T A A C G T A G T C C G A T A T C G A C G T A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T