Information for 5-TTATTAAATTATAAAA (Motif 7)

G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A
Reverse Opposite:
A G C T A C G T A G C T A C G T G T C A A G C T C G T A C T G A A C G T A C G T A C G T C G T A G C T A A C G T C T G A C G T A
p-value:1e-16
log p-value:-3.691e+01
Information Content per bp:1.796
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 26.7bp
Average Position of motif in Background56.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0018.1_Dbx1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTATTAAATTATAAAA--
-TAATTAATTAATAATTA
 G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A A C G T A C G T
A C G T G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTATTAAATTATAAAA
TAATTAAATTA-----
 G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTATTAAATTATAAAA---
---TATAATTATAATATTC
 G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTATTAAATTATAAAA
ACGGCCATAAAATTAAT---
 A C G T A C G T A C G T A C G T G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTATTAAATTATAAAA
CCATAATTAATTACA---
 A C G T A C G T G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTATTAAATTATAAAA
TAATTAAATTA-----
 G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTATTAAATTATAAAA---
---GCTAATTATAATTATC
 G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTATTAAATTATAAAA---
---TAAGATTATAATACGG
 G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTATTAAATTATAAAA
--ATTAAA--------
 G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTATTAAATTATAAAA
NNNTATTGAATTGNNN--
 A C G T A C G T G C A T G A C T C G T A C A G T C G A T C G T A C G T A C G T A A G C T A C G T C T G A A C G T C G T A C T G A G T C A T C G A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T