Information for 12-GCTCTCAATG (Motif 24)

A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G
Reverse Opposite:
G T A C C G T A A C G T A C G T T A C G C T G A A T C G C T G A A C T G G T A C
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.834
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif177.1
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets46.8 +/- 30.3bp
Average Position of motif in Background57.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----GCTCTCAATG--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCTCTCAATG
GCTGTCAA--
 A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTCAATG-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTCAATG-
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTCAATG-
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTCAATG-
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTCAATG-
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTCAATG-
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTCTCAATG
CCTGTCAA--
 A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCTCTCAATG
AGCCACTCAAG-
 A C G T A C G T A C T G A G T C A G C T T A G C A G C T A T G C C G T A T G C A A C G T A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T