Information for 10-TGGTATCTGGCAT (Motif 20)

C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T
Reverse Opposite:
T G C A C G A T C A T G T A G C G A T C C G T A T A C G G T C A C A G T C G T A G A T C G T A C G C T A
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.653
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif388.6
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets47.6 +/- 21.4bp
Average Position of motif in Background47.4 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:TGGTATCTGGCAT
---GGTCTGGCAT
 C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGTATCTGGCAT--
NNTNNTGTCTGGNNTNG
 A C G T A C G T C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGGTATCTGGCAT-
-----NTTGGCANN
 C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGTATCTGGCAT
----GGTTGGCAT
 C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGGTATCTGGCAT
------TTGGCA-
 C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGGTATCTGGCAT
-----CTTGGCAA
 C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGGTATCTGGCAT
----ARNTGACA-
 C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGGTATCTGGCAT-
----NNTTGGCANN
 C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGGTATCTGGCAT--
---TGTCTGDCACCT
 C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGGTATCTGGCAT
GYCTGGYYTNTGTCA-
 A C G T A C G T A C G T C G A T C A T G C T A G G C A T G T C A C A G T A G T C G A C T C T A G A T C G G T A C C G T A A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T