Information for 9-ATTAAATGVCCATTAH (Motif 14)

G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
Reverse Opposite:
C G T A A C G T C T G A C G T A C G A T A C T G A T C G A G T C A G T C C G T A A C G T A C G T C G A T C G T A T G C A C A G T
p-value:1e-12
log p-value:-2.963e+01
Information Content per bp:1.771
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.2 +/- 23.1bp
Average Position of motif in Background58.0 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTAAATGVCCATTAH
GCTAAACGGT------
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATTAAATGVCCATTAH
-----ATGACCTTGAA
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
A C G T A C G T A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATTAAATGVCCATTAH
-TTAAGTGC-------
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATTAAATGVCCATTAH
-GTTAATGGCC-----
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATTAAATGVCCATTAH
GCTAATTGCT------
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATTAAATGVCCATTAH
----NATGACCTTGA-
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
A C G T A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAATGVCCATTAH
NNAATTAATGACCNNN--
 A C G T A C G T G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATTAAATGVCCATTAH
ATTAAA----------
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ATTAAATGVCCATTAH
------TGACCTTGAT
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATTAAATGVCCATTAH
-----ATGACCTTGA-
 G T C A A C G T C G A T C G T A C G T A C G T A A C G T A C T G T C A G A T G C A G T C C G T A C G A T A G C T C G T A G C A T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T